Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Gm12742-201ENSMUST00000117326 410 ntBASIC12.84□□□□□ -0.35
Mmp13P33435 Gm14660-201ENSMUST00000119809 575 ntBASIC12.84□□□□□ -0.35
Mmp13P33435 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Gm4271-201ENSMUST00000174444 973 ntBASIC12.84□□□□□ -0.35
Mmp13P33435 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.84□□□□□ -0.35
Mmp13P33435 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Mmp13P33435 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.83□□□□□ -0.35
Mmp13P33435 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Mmp13P33435 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.83□□□□□ -0.35
Mmp13P33435 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.83□□□□□ -0.35
Mmp13P33435 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Mmp13P33435 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.83□□□□□ -0.36
Mmp13P33435 Gm12384-201ENSMUST00000119228 919 ntBASIC12.83□□□□□ -0.36
Mmp13P33435 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.83□□□□□ -0.36
Mmp13P33435 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.83□□□□□ -0.36
Mmp13P33435 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.83□□□□□ -0.36
Mmp13P33435 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Mmp13P33435 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Mmp13P33435 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Mmp13P33435 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Mmp13P33435 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Mmp13P33435 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Mmp13P33435 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Mmp13P33435 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp13P33435 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.82□□□□□ -0.36
Mmp13P33435 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.82□□□□□ -0.36
Mmp13P33435 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Mmp13P33435 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Mmp13P33435 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Gm16177-201ENSMUST00000120728 718 ntBASIC12.82□□□□□ -0.36
Mmp13P33435 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Snora78-201ENSMUST00000158630 128 ntBASIC12.82□□□□□ -0.36
Mmp13P33435 Gm37497-201ENSMUST00000195830 798 ntBASIC12.82□□□□□ -0.36
Mmp13P33435 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.82□□□□□ -0.36
Mmp13P33435 Gm19184-201ENSMUST00000196798 928 ntBASIC12.82□□□□□ -0.36
Mmp13P33435 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.82□□□□□ -0.36
Mmp13P33435 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp13P33435 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp13P33435 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp13P33435 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms