Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxc11P31313 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc11P31313 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc11P31313 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxc11P31313 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
Hoxc11P31313 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hoxc11P31313 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.17□□□□□ -0.46
Hoxc11P31313 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm31256-201ENSMUST00000194705 506 ntBASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm38092-201ENSMUST00000195600 653 ntBASIC12.17□□□□□ -0.46
Hoxc11P31313 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.17□□□□□ -0.46
Hoxc11P31313 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Hoxc11P31313 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.17□□□□□ -0.46
Hoxc11P31313 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc11P31313 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc11P31313 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.17□□□□□ -0.46
Hoxc11P31313 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms