Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl3P27659 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl3P27659 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.88□□□□□ -0.51
Rpl3P27659 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.88□□□□□ -0.51
Rpl3P27659 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.88□□□□□ -0.51
Rpl3P27659 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rpl3P27659 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rpl3P27659 Gm8227-201ENSMUST00000223306 571 ntBASIC11.88□□□□□ -0.51
Rpl3P27659 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.88□□□□□ -0.51
Rpl3P27659 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Rpl3P27659 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.88□□□□□ -0.51
Rpl3P27659 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rpl3P27659 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rpl3P27659 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.88□□□□□ -0.51
Rpl3P27659 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rpl3P27659 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl3P27659 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.87□□□□□ -0.51
Rpl3P27659 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.87□□□□□ -0.51
Rpl3P27659 Gm43818-201ENSMUST00000200605 466 ntBASIC11.87□□□□□ -0.51
Rpl3P27659 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.87□□□□□ -0.51
Rpl3P27659 Gm24136-201ENSMUST00000083374 165 ntBASIC11.87□□□□□ -0.51
Rpl3P27659 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.87□□□□□ -0.51
Rpl3P27659 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.87□□□□□ -0.51
Rpl3P27659 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl3P27659 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Rpl3P27659 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rpl3P27659 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl3P27659 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.86□□□□□ -0.51
Rpl3P27659 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.86□□□□□ -0.51
Rpl3P27659 Gm5904-201ENSMUST00000210286 865 ntBASIC11.86□□□□□ -0.51
Rpl3P27659 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.86□□□□□ -0.51
Rpl3P27659 Gm45930-201ENSMUST00000221330 292 ntBASIC11.86□□□□□ -0.51
Rpl3P27659 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.86□□□□□ -0.51
Rpl3P27659 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms