Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.78□□□□□ -0.52
Clk1P22518 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.78□□□□□ -0.52
Clk1P22518 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Gm12203-201ENSMUST00000118235 598 ntBASIC11.78□□□□□ -0.52
Clk1P22518 Gm14921-201ENSMUST00000118643 908 ntBASIC11.78□□□□□ -0.52
Clk1P22518 Gm12209-201ENSMUST00000120089 596 ntBASIC11.78□□□□□ -0.52
Clk1P22518 Gm13123-201ENSMUST00000122173 492 ntBASIC11.78□□□□□ -0.52
Clk1P22518 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Gm22331-201ENSMUST00000158066 136 ntBASIC11.78□□□□□ -0.52
Clk1P22518 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.78□□□□□ -0.52
Clk1P22518 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.78□□□□□ -0.52
Clk1P22518 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.78□□□□□ -0.52
Clk1P22518 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.78□□□□□ -0.52
Clk1P22518 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.78□□□□□ -0.52
Clk1P22518 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clk1P22518 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Clk1P22518 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.77□□□□□ -0.52
Clk1P22518 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Clk1P22518 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.77□□□□□ -0.52
Clk1P22518 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clk1P22518 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.77□□□□□ -0.53
Clk1P22518 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.77□□□□□ -0.53
Clk1P22518 Gm12291-201ENSMUST00000121627 311 ntBASIC11.77□□□□□ -0.53
Clk1P22518 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Clk1P22518 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.77□□□□□ -0.53
Clk1P22518 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Gm4271-201ENSMUST00000174444 973 ntBASIC11.77□□□□□ -0.53
Clk1P22518 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.77□□□□□ -0.53
Clk1P22518 Gm27331-201ENSMUST00000183705 60 ntBASIC11.77□□□□□ -0.53
Clk1P22518 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.77□□□□□ -0.53
Clk1P22518 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Clk1P22518 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Clk1P22518 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Clk1P22518 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Clk1P22518 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clk1P22518 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.77□□□□□ -0.53
Clk1P22518 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clk1P22518 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms