Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lire1P11260 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lire1P11260 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lire1P11260 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lire1P11260 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lire1P11260 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Lire1P11260 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Lire1P11260 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lire1P11260 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.98□□□□□ -0.49
Lire1P11260 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lire1P11260 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.97□□□□□ -0.49
Lire1P11260 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.97□□□□□ -0.49
Lire1P11260 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lire1P11260 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Lire1P11260 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.97□□□□□ -0.49
Lire1P11260 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.97□□□□□ -0.49
Lire1P11260 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.97□□□□□ -0.49
Lire1P11260 Gm27514-201ENSMUST00000183692 110 ntBASIC11.97□□□□□ -0.49
Lire1P11260 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.97□□□□□ -0.49
Lire1P11260 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.97□□□□□ -0.49
Lire1P11260 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.97□□□□□ -0.49
Lire1P11260 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lire1P11260 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lire1P11260 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lire1P11260 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Lire1P11260 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.96□□□□□ -0.49
Lire1P11260 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lire1P11260 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lire1P11260 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.96□□□□□ -0.49
Lire1P11260 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Gm5187-201ENSMUST00000117317 991 ntBASIC11.96□□□□□ -0.49
Lire1P11260 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Lire1P11260 Gm13689-201ENSMUST00000119360 685 ntBASIC11.96□□□□□ -0.49
Lire1P11260 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.96□□□□□ -0.49
Lire1P11260 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.96□□□□□ -0.49
Lire1P11260 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.96□□□□□ -0.49
Lire1P11260 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.96□□□□□ -0.49
Lire1P11260 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.96□□□□□ -0.49
Lire1P11260 Gm43179-201ENSMUST00000198797 275 ntBASIC11.96□□□□□ -0.49
Lire1P11260 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.96□□□□□ -0.49
Lire1P11260 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Gm24447-201ENSMUST00000083977 338 ntBASIC11.96□□□□□ -0.49
Lire1P11260 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lire1P11260 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms