Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm23935-201ENSMUST00000102303 57 ntBASIC11.03□□□□□ -0.64
P04224 Gm24270-201ENSMUST00000102326 57 ntBASIC11.03□□□□□ -0.64
P04224 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm12485-201ENSMUST00000119641 291 ntBASIC11.03□□□□□ -0.64
P04224 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.03□□□□□ -0.64
P04224 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm24245-201ENSMUST00000157318 57 ntBASIC11.03□□□□□ -0.64
P04224 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.03□□□□□ -0.64
P04224 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P04224 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.03□□□□□ -0.64
P04224 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.03□□□□□ -0.64
P04224 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
P04224 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.03□□□□□ -0.64
P04224 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm7775-201ENSMUST00000218871 853 ntBASIC11.03□□□□□ -0.64
P04224 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.03□□□□□ -0.64
P04224 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.03□□□□□ -0.64
P04224 Gm9063-201ENSMUST00000223299 582 ntBASIC11.03□□□□□ -0.64
P04224 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.03□□□□□ -0.64
P04224 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.03□□□□□ -0.64
P04224 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.03□□□□□ -0.64
P04224 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
P04224 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.03□□□□□ -0.64
P04224 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.03□□□□□ -0.64
P04224 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.03□□□□□ -0.64
P04224 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.03□□□□□ -0.64
P04224 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
P04224 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P04224 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P04224 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
P04224 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.02□□□□□ -0.64
P04224 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.02□□□□□ -0.64
P04224 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.02□□□□□ -0.64
P04224 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
P04224 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
P04224 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P04224 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P04224 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.02□□□□□ -0.65
P04224 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
P04224 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.02□□□□□ -0.65
P04224 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
P04224 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.02□□□□□ -0.65
P04224 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.02□□□□□ -0.65
P04224 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.02□□□□□ -0.65
P04224 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.02□□□□□ -0.65
P04224 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.02□□□□□ -0.65
P04224 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.02□□□□□ -0.65
P04224 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P04224 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P04224 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.02□□□□□ -0.65
P04224 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.02□□□□□ -0.65
P04224 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04224 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.02□□□□□ -0.65
P04224 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P04224 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
P04224 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.01□□□□□ -0.65
P04224 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.01□□□□□ -0.65
P04224 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04224 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
P04224 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms