Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H3f3cP02301 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.8□□□□□ -0.68
H3f3cP02301 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.8□□□□□ -0.68
H3f3cP02301 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3cP02301 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.79□□□□□ -0.68
H3f3cP02301 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
H3f3cP02301 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.79□□□□□ -0.68
H3f3cP02301 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
H3f3cP02301 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.79□□□□□ -0.68
H3f3cP02301 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
H3f3cP02301 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.79□□□□□ -0.68
H3f3cP02301 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
H3f3cP02301 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.79□□□□□ -0.68
H3f3cP02301 Gm38092-201ENSMUST00000195600 653 ntBASIC10.79□□□□□ -0.68
H3f3cP02301 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.79□□□□□ -0.68
H3f3cP02301 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.79□□□□□ -0.68
H3f3cP02301 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.79□□□□□ -0.68
H3f3cP02301 Gm19309-201ENSMUST00000218295 205 ntBASIC10.79□□□□□ -0.68
H3f3cP02301 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Gm24526-201ENSMUST00000082921 158 ntBASIC10.79□□□□□ -0.68
H3f3cP02301 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
H3f3cP02301 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.79□□□□□ -0.68
H3f3cP02301 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
H3f3cP02301 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H3f3cP02301 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.79□□□□□ -0.68
H3f3cP02301 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
H3f3cP02301 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.78□□□□□ -0.68
H3f3cP02301 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.78□□□□□ -0.68
H3f3cP02301 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.78□□□□□ -0.68
H3f3cP02301 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Gm7809-201ENSMUST00000153199 742 ntBASIC10.78□□□□□ -0.68
H3f3cP02301 Gm24548-201ENSMUST00000158650 108 ntBASIC10.78□□□□□ -0.68
H3f3cP02301 Gm16296-201ENSMUST00000159905 325 ntBASIC10.78□□□□□ -0.68
H3f3cP02301 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
H3f3cP02301 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
H3f3cP02301 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.78□□□□□ -0.68
H3f3cP02301 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
H3f3cP02301 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
H3f3cP02301 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
H3f3cP02301 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
H3f3cP02301 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms