Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.67□□□□□ -0.38
ChkaO54804 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.67□□□□□ -0.38
ChkaO54804 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
ChkaO54804 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ChkaO54804 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.67□□□□□ -0.38
ChkaO54804 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.67□□□□□ -0.38
ChkaO54804 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.67□□□□□ -0.38
ChkaO54804 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.67□□□□□ -0.38
ChkaO54804 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.67□□□□□ -0.38
ChkaO54804 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.67□□□□□ -0.38
ChkaO54804 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ChkaO54804 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ChkaO54804 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.66□□□□□ -0.38
ChkaO54804 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.66□□□□□ -0.38
ChkaO54804 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.66□□□□□ -0.38
ChkaO54804 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ChkaO54804 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ChkaO54804 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.66□□□□□ -0.38
ChkaO54804 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
ChkaO54804 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.66□□□□□ -0.38
ChkaO54804 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.66□□□□□ -0.38
ChkaO54804 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.66□□□□□ -0.38
ChkaO54804 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ChkaO54804 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ChkaO54804 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ChkaO54804 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ChkaO54804 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ChkaO54804 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.65□□□□□ -0.38
ChkaO54804 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ChkaO54804 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms