Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Atf6bO35451 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.93□□□□□ -0.66
Atf6bO35451 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Gm5187-201ENSMUST00000117317 991 ntBASIC10.93□□□□□ -0.66
Atf6bO35451 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.93□□□□□ -0.66
Atf6bO35451 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Gm17420-201ENSMUST00000164753 153 ntBASIC10.93□□□□□ -0.66
Atf6bO35451 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
Atf6bO35451 Snora73a-201ENSMUST00000082453 205 ntBASIC10.93□□□□□ -0.66
Atf6bO35451 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Atf6bO35451 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Atf6bO35451 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Atf6bO35451 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Atf6bO35451 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Atf6bO35451 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Gm13392-201ENSMUST00000117708 150 ntBASIC10.92□□□□□ -0.66
Atf6bO35451 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.92□□□□□ -0.66
Atf6bO35451 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.92□□□□□ -0.66
Atf6bO35451 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Gm8099-201ENSMUST00000200510 742 ntBASIC10.92□□□□□ -0.66
Atf6bO35451 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.92□□□□□ -0.66
Atf6bO35451 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Gm32025-201ENSMUST00000217960 307 ntBASIC10.92□□□□□ -0.66
Atf6bO35451 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Atf6bO35451 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.92□□□□□ -0.66
Atf6bO35451 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.92□□□□□ -0.66
Atf6bO35451 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6bO35451 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.92□□□□□ -0.66
Atf6bO35451 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6bO35451 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6bO35451 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms