Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ebf3O08791 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ebf3O08791 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.06□□□□□ -0.32
Ebf3O08791 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ebf3O08791 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Nsd1-205ENSMUST00000224693 852 ntBASIC13.06□□□□□ -0.32
Ebf3O08791 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ebf3O08791 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Matn2-203ENSMUST00000226766 3252 ntBASIC13.06□□□□□ -0.32
Ebf3O08791 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.06□□□□□ -0.32
Ebf3O08791 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ebf3O08791 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf3O08791 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf3O08791 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ebf3O08791 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf3O08791 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Ebf3O08791 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Gm14028-201ENSMUST00000117434 479 ntBASIC13.05□□□□□ -0.32
Ebf3O08791 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf3O08791 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.05□□□□□ -0.32
Ebf3O08791 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ebf3O08791 Gm19931-201ENSMUST00000198920 368 ntBASIC13.05□□□□□ -0.32
Ebf3O08791 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.05□□□□□ -0.32
Ebf3O08791 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf3O08791 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ebf3O08791 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ebf3O08791 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ebf3O08791 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.05□□□□□ -0.32
Ebf3O08791 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ebf3O08791 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf3O08791 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.05□□□□□ -0.32
Ebf3O08791 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Gm12058-201ENSMUST00000118614 437 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 B9d1os-201ENSMUST00000137010 674 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Gm25043-201ENSMUST00000158604 212 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.04□□□□□ -0.32
Ebf3O08791 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.04□□□□□ -0.32
Ebf3O08791 Mir6979-201ENSMUST00000183927 56 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Gm3096-201ENSMUST00000185770 364 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.04□□□□□ -0.32
Ebf3O08791 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf3O08791 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms