Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Syt7-204ENSMUST00000223586 1344 ntBASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Gm15371-201ENSMUST00000117057 784 ntBASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Gm5687-201ENSMUST00000118252 640 ntBASIC11.42□□□□□ -0.58
Shisa8J3QNX5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Gm44397-201ENSMUST00000195950 113 ntBASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa8J3QNX5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.41□□□□□ -0.58
Shisa8J3QNX5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gm12341-201ENSMUST00000119724 503 ntBASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gm14760-201ENSMUST00000121831 999 ntBASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shisa8J3QNX5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms