Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Gm27438-201ENSMUST00000183480 110 ntBASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Gm37644-201ENSMUST00000192190 2270 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm43447-201ENSMUST00000198471 1535 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm22711-201ENSMUST00000116890 133 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm11246-201ENSMUST00000120880 345 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm8815-201ENSMUST00000173809 620 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm38151-201ENSMUST00000195085 289 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gm9826-201ENSMUST00000029124 1299 ntBASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcf11G3X9Z4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Gm37437-201ENSMUST00000194451 1937 ntBASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Gm12407-201ENSMUST00000180219 324 ntBASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 AC132901.1-201ENSMUST00000224345 508 ntBASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 CT009713.8-202ENSMUST00000224732 385 ntBASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Gm13910-201ENSMUST00000121752 1428 ntBASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcf11G3X9Z4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 n-R5s64-201ENSMUST00000102019 119 ntBASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Gm11628-201ENSMUST00000117568 171 ntBASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Pcf11G3X9Z4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Gm5780-201ENSMUST00000217774 1834 ntBASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Gm37458-201ENSMUST00000194055 410 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms