Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm12164-201ENSMUST00000121695 551 ntBASIC11.78□□□□□ -0.52
Colca2F8VPY8 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm2875-201ENSMUST00000211333 360 ntBASIC11.78□□□□□ -0.52
Colca2F8VPY8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.78□□□□□ -0.52
Colca2F8VPY8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.78□□□□□ -0.52
Colca2F8VPY8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Colca2F8VPY8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Colca2F8VPY8 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.77□□□□□ -0.52
Colca2F8VPY8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Colca2F8VPY8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Colca2F8VPY8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Colca2F8VPY8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Colca2F8VPY8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Colca2F8VPY8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Colca2F8VPY8 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.77□□□□□ -0.52
Colca2F8VPY8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm8731-201ENSMUST00000118088 412 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm4654-201ENSMUST00000183305 982 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm29499-201ENSMUST00000189151 486 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm28329-201ENSMUST00000191208 689 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm29171-201ENSMUST00000191397 486 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.77□□□□□ -0.53
Colca2F8VPY8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Colca2F8VPY8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm23912-201ENSMUST00000104687 87 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm22711-201ENSMUST00000116890 133 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm12579-201ENSMUST00000118040 783 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm11660-201ENSMUST00000120955 412 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms