Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Gm32999-201ENSMUST00000192693 562 ntBASIC12.75□□□□□ -0.37
Ccdc149F6V035 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.75□□□□□ -0.37
Ccdc149F6V035 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc149F6V035 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.75□□□□□ -0.37
Ccdc149F6V035 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc149F6V035 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.74□□□□□ -0.37
Ccdc149F6V035 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Gm43138-201ENSMUST00000199123 708 ntBASIC12.74□□□□□ -0.37
Ccdc149F6V035 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.74□□□□□ -0.37
Ccdc149F6V035 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Gm18041-201ENSMUST00000218210 618 ntBASIC12.74□□□□□ -0.37
Ccdc149F6V035 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.74□□□□□ -0.37
Ccdc149F6V035 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.74□□□□□ -0.37
Ccdc149F6V035 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc149F6V035 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms