Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Gm11511-201ENSMUST00000118146 540 ntBASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Gm18706-201ENSMUST00000210053 1066 ntBASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Gm9661-201ENSMUST00000221611 1122 ntBASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scaf11E9PZM7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Gm19680-201ENSMUST00000095050 1513 ntBASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 AC124433.1-201ENSMUST00000224483 1063 ntBASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Gm5434-202ENSMUST00000222384 1451 ntBASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Gm5434-201ENSMUST00000071825 1451 ntBASIC17.22■□□□□ 0.35
Scaf11E9PZM7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm14193-201ENSMUST00000105067 153 ntBASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 n-R5s84-201ENSMUST00000122591 109 ntBASIC17.21■□□□□ 0.35
Scaf11E9PZM7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Mir6407-201ENSMUST00000184510 101 ntBASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 AC136376.2-201ENSMUST00000228819 490 ntBASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms