Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm26461-201ENSMUST00000175064 290 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Gm13097-201ENSMUST00000210722 397 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Mir339-201ENSMUST00000083659 96 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh17E9PXF0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh17E9PXF0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm11930-201ENSMUST00000117788 190 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm12058-201ENSMUST00000118614 437 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm38317-201ENSMUST00000195564 343 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm44405-201ENSMUST00000198952 126 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm45925-201ENSMUST00000218882 744 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh17E9PXF0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh17E9PXF0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh17E9PXF0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh17E9PXF0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh17E9PXF0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Pcdh17E9PXF0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh17E9PXF0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh17E9PXF0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms