Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm9522-201ENSMUST00000182394 926 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm10576-201ENSMUST00000191927 825 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Mir339-201ENSMUST00000083659 96 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm12887B1AVM1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Gm14350-201ENSMUST00000116642 640 ntBASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Gm14822-201ENSMUST00000122247 291 ntBASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.11□□□□□ -0.79
Gm12887B1AVM1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms