Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm11439-201ENSMUST00000118598 409 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm24990-201ENSMUST00000157406 323 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm23119-201ENSMUST00000158610 140 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm25700-201ENSMUST00000177693 110 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm42937-201ENSMUST00000197360 752 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm9996-201ENSMUST00000070359 913 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm26035-201ENSMUST00000083065 308 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcb1Q9Z0H3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcb1Q9Z0H3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Gm24934-201ENSMUST00000103764 111 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Gm14760-201ENSMUST00000121831 999 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Gm26461-201ENSMUST00000175064 290 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms