Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gm11930-201ENSMUST00000117788 190 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gm13875-201ENSMUST00000120162 282 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gm15276-201ENSMUST00000145953 498 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx9Q9WUH2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm12058-201ENSMUST00000118614 437 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm15547-201ENSMUST00000122152 333 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms