Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn4aQ9ER60 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Gm4895-201ENSMUST00000181646 1137 ntBASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Gm43547-201ENSMUST00000197729 328 ntBASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4aQ9ER60 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scn4aQ9ER60 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC16.64■□□□□ 0.25
Scn4aQ9ER60 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Gm12736-201ENSMUST00000119330 236 ntBASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Gm7939-201ENSMUST00000201233 1050 ntBASIC16.64■□□□□ 0.25
Scn4aQ9ER60 BC080696-201ENSMUST00000202858 1218 ntBASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4aQ9ER60 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Gm25394-201ENSMUST00000157338 133 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Mir6359-201ENSMUST00000183668 81 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Mir7035-201ENSMUST00000184713 82 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Gm12470-201ENSMUST00000117239 1049 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Mir8093-201ENSMUST00000185043 137 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Gm17936-201ENSMUST00000199413 988 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Gm43966-201ENSMUST00000203301 612 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Gm44814-201ENSMUST00000207018 434 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Gm2594-201ENSMUST00000214774 742 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.63■□□□□ 0.25
Scn4aQ9ER60 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn4aQ9ER60 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4aQ9ER60 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4aQ9ER60 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4aQ9ER60 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4aQ9ER60 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn4aQ9ER60 Gm43163-201ENSMUST00000196571 442 ntBASIC16.62■□□□□ 0.25
Scn4aQ9ER60 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC16.62■□□□□ 0.25
Scn4aQ9ER60 Gm6450-201ENSMUST00000200896 574 ntBASIC16.62■□□□□ 0.25
Scn4aQ9ER60 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms