Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm8927-201ENSMUST00000181978 981 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm21470-201ENSMUST00000187680 696 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Chchd1-203ENSMUST00000224633 557 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm3222-201ENSMUST00000071282 990 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmg20aQ9DC33 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hmg20aQ9DC33 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmg20aQ9DC33 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Hmg20aQ9DC33 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmg20aQ9DC33 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.46□□□□□ -0.58
Hmg20aQ9DC33 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmg20aQ9DC33 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmg20aQ9DC33 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Mir449b-201ENSMUST00000104833 80 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Gm46209-201ENSMUST00000217912 553 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmg20aQ9DC33 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmg20aQ9DC33 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmg20aQ9DC33 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.44□□□□□ -0.58
Hmg20aQ9DC33 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmg20aQ9DC33 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms