Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm42937-201ENSMUST00000197360 752 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
U2af1Q9D883 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
U2af1Q9D883 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
U2af1Q9D883 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.48■□□□□ 0.23
U2af1Q9D883 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
U2af1Q9D883 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
U2af1Q9D883 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.48■□□□□ 0.23
U2af1Q9D883 Gm25668-201ENSMUST00000157700 129 ntBASIC16.48■□□□□ 0.23
U2af1Q9D883 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
U2af1Q9D883 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
U2af1Q9D883 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
U2af1Q9D883 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.48■□□□□ 0.23
U2af1Q9D883 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
U2af1Q9D883 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
U2af1Q9D883 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.47■□□□□ 0.23
U2af1Q9D883 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Gm3096-201ENSMUST00000185770 364 ntBASIC16.47■□□□□ 0.23
U2af1Q9D883 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.47■□□□□ 0.23
U2af1Q9D883 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
U2af1Q9D883 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.47■□□□□ 0.23
U2af1Q9D883 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
U2af1Q9D883 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
U2af1Q9D883 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
U2af1Q9D883 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
U2af1Q9D883 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.46■□□□□ 0.23
U2af1Q9D883 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.46■□□□□ 0.23
U2af1Q9D883 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
U2af1Q9D883 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
U2af1Q9D883 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
U2af1Q9D883 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
U2af1Q9D883 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms