Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm11524-201ENSMUST00000119349 807 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm13813-201ENSMUST00000120998 787 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm26464-201ENSMUST00000157094 305 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm42550-201ENSMUST00000201553 960 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm26315-201ENSMUST00000083890 321 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm4875-201ENSMUST00000118257 786 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm19078-201ENSMUST00000206311 727 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.61□□□□□ -0.39
Trim42Q9D2H5 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Cog3-203ENSMUST00000227473 4197 ntBASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gm27390-201ENSMUST00000184516 176 ntBASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gm6888-201ENSMUST00000221983 706 ntBASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Thoc7-209ENSMUST00000225325 765 ntBASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms