Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ddx28Q9CWT6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm11978-201ENSMUST00000122315 466 ntBASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm6152-201ENSMUST00000151704 340 ntBASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm45384-201ENSMUST00000210451 277 ntBASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ddx28Q9CWT6 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ddx28Q9CWT6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms