Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gm14350-201ENSMUST00000116642 640 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gm14921-201ENSMUST00000118643 908 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gm5354-201ENSMUST00000182417 973 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gm28760-201ENSMUST00000185995 736 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gm42599-201ENSMUST00000201308 469 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Mir339-201ENSMUST00000083659 96 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Krt88Q9CPR6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Krt88Q9CPR6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms