Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Gm16296-201ENSMUST00000159905 325 ntBASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Gm9908-201ENSMUST00000211534 448 ntBASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Gm10146-201ENSMUST00000072739 309 ntBASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap3Q99LM2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm43417-201ENSMUST00000201586 5207 ntBASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm44775-201ENSMUST00000207266 1456 ntBASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm14928-201ENSMUST00000120198 477 ntBASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm27390-201ENSMUST00000184516 176 ntBASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm10012-201ENSMUST00000078252 192 ntBASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap3Q99LM2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms