Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Gm15515-201ENSMUST00000117827 822 ntBASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Gm43962-201ENSMUST00000203898 190 ntBASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd2Q99JR8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gm13035-201ENSMUST00000117496 342 ntBASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gm17827-201ENSMUST00000211825 742 ntBASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gm5369-201ENSMUST00000217499 588 ntBASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Ntng1-201ENSMUST00000051253 327 ntBASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd2Q99JR8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd2Q99JR8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd2Q99JR8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd2Q99JR8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Smarcd2Q99JR8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd2Q99JR8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd2Q99JR8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd2Q99JR8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms