Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Gm15370-201ENSMUST00000117158 253 ntBASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm14999-201ENSMUST00000121039 624 ntBASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm39404-201ENSMUST00000216350 313 ntBASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha9Q91Y11 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 Rubie-203ENSMUST00000227803 2430 ntBASIC13.33□□□□□ -0.27
Pcdha9Q91Y11 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gm12241-201ENSMUST00000118330 726 ntBASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gm13570-201ENSMUST00000140763 309 ntBASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gm44124-201ENSMUST00000204159 472 ntBASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms