Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm9396-201ENSMUST00000076703 567 ntBASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Gm24136-201ENSMUST00000083374 165 ntBASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm13315-201ENSMUST00000120376 991 ntBASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm11597-201ENSMUST00000121423 964 ntBASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Mir1982-201ENSMUST00000157368 74 ntBASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm27514-201ENSMUST00000183692 110 ntBASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm44405-201ENSMUST00000198952 126 ntBASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb1Q91Y08 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Gm9022-201ENSMUST00000182482 992 ntBASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Gm27243-201ENSMUST00000183964 521 ntBASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms