Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tram1Q91V04 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Gm15371-201ENSMUST00000117057 784 ntBASIC10.81□□□□□ -0.68
Tram1Q91V04 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Gm5279-201ENSMUST00000199575 745 ntBASIC10.81□□□□□ -0.68
Tram1Q91V04 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Tram1Q91V04 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tram1Q91V04 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.81□□□□□ -0.68
Tram1Q91V04 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.81□□□□□ -0.68
Tram1Q91V04 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tram1Q91V04 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.81□□□□□ -0.68
Tram1Q91V04 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.8□□□□□ -0.68
Tram1Q91V04 Gm16202-201ENSMUST00000117532 544 ntBASIC10.8□□□□□ -0.68
Tram1Q91V04 Gm15376-201ENSMUST00000122258 783 ntBASIC10.8□□□□□ -0.68
Tram1Q91V04 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Gm27525-201ENSMUST00000184465 107 ntBASIC10.8□□□□□ -0.68
Tram1Q91V04 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.8□□□□□ -0.68
Tram1Q91V04 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tram1Q91V04 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tram1Q91V04 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm8000-201ENSMUST00000188378 592 ntBASIC10.79□□□□□ -0.68
Tram1Q91V04 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.79□□□□□ -0.68
Tram1Q91V04 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms