Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm11803-201ENSMUST00000119966 444 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm16296-201ENSMUST00000159905 325 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm8810-201ENSMUST00000172895 754 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.98□□□□□ -0.33
Trim60Q8VI40 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim60Q8VI40 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm12203-201ENSMUST00000118235 598 ntBASIC12.97□□□□□ -0.33
Trim60Q8VI40 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm12209-201ENSMUST00000120089 596 ntBASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm11918-201ENSMUST00000121660 179 ntBASIC12.97□□□□□ -0.33
Trim60Q8VI40 Mir1894-201ENSMUST00000122802 81 ntBASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.97□□□□□ -0.33
Trim60Q8VI40 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms