Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.59□□□□□ -0.39
Vps39Q8R5L3 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Gm24526-201ENSMUST00000082921 158 ntBASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Vps39Q8R5L3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps39Q8R5L3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Snord83b-201ENSMUST00000104546 94 ntBASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Gm11478-201ENSMUST00000117851 599 ntBASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Gm15703-201ENSMUST00000120250 880 ntBASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Gm27839-201ENSMUST00000184242 106 ntBASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Gm29649-201ENSMUST00000185649 419 ntBASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.58□□□□□ -0.4
Vps39Q8R5L3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps39Q8R5L3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Gm16296-201ENSMUST00000159905 325 ntBASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms