Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gm13226-201ENSMUST00000117838 404 ntBASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gm16379-201ENSMUST00000161469 348 ntBASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gm25927-201ENSMUST00000175058 117 ntBASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gm8762-201ENSMUST00000193486 339 ntBASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Gm12502-201ENSMUST00000120197 444 ntBASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Gm9630-201ENSMUST00000178304 885 ntBASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim29Q8R2Q0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim29Q8R2Q0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim29Q8R2Q0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Gm14660-201ENSMUST00000119809 575 ntBASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Rmrp-201ENSMUST00000157463 271 ntBASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Mir7085-201ENSMUST00000184353 66 ntBASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim29Q8R2Q0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms