Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm44958-201ENSMUST00000203734 736 ntBASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Gm9062-201ENSMUST00000117712 727 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Gm23699-201ENSMUST00000158835 135 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Chmp7Q8R1T1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Chmp7Q8R1T1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Chmp7Q8R1T1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp7Q8R1T1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp7Q8R1T1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp7Q8R1T1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12616-201ENSMUST00000118594 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12624-201ENSMUST00000177615 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12621-201ENSMUST00000177760 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12615-201ENSMUST00000177970 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12622-201ENSMUST00000177975 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12627-201ENSMUST00000178412 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12625-201ENSMUST00000179122 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12614-201ENSMUST00000179586 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm12613-201ENSMUST00000180323 382 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm37444-201ENSMUST00000193605 439 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp7Q8R1T1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms