Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm14350-201ENSMUST00000116642 640 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm5354-201ENSMUST00000182417 973 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm27702-201ENSMUST00000184512 56 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm27838-201ENSMUST00000184829 128 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm44069-201ENSMUST00000204898 506 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm6458-201ENSMUST00000211573 635 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Gm16202-201ENSMUST00000117532 544 ntBASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Gm13689-201ENSMUST00000119360 685 ntBASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Gm28760-201ENSMUST00000185995 736 ntBASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28bQ8CEG5 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Gm5687-201ENSMUST00000118252 640 ntBASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Gm13616-201ENSMUST00000120600 222 ntBASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Gm10576-201ENSMUST00000191927 825 ntBASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc28bQ8CEG5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms