Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Gm18636-201ENSMUST00000218846 1066 ntBASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Gm37542-201ENSMUST00000192563 2832 ntBASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Gm29649-201ENSMUST00000185649 419 ntBASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc38Q8CDN8 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Gm19184-201ENSMUST00000196798 928 ntBASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Gm24526-201ENSMUST00000082921 158 ntBASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc38Q8CDN8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Gm12384-201ENSMUST00000119228 919 ntBASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Gm29127-201ENSMUST00000188304 517 ntBASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc38Q8CDN8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms