Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm13829-201ENSMUST00000119600 138 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm27486-201ENSMUST00000184923 80 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm8463-201ENSMUST00000208573 613 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrif1Q8CDD9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Mir686-201ENSMUST00000102174 109 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm13813-201ENSMUST00000120998 787 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm35960-201ENSMUST00000202712 767 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lrif1Q8CDD9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms