Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Gm18227-201ENSMUST00000211082 1468 ntBASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Gm18222-201ENSMUST00000202416 1387 ntBASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Gm8908-201ENSMUST00000121633 1024 ntBASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Gm43438-201ENSMUST00000198133 379 ntBASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Gm6334-201ENSMUST00000207083 228 ntBASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc60Q8C4J0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16■□□□□ 0.15
Ccdc60Q8C4J0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm12314-201ENSMUST00000118104 538 ntBASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm27243-201ENSMUST00000183964 521 ntBASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc60Q8C4J0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm25214-201ENSMUST00000104573 129 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms