Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Usp44Q8C2S0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Usp44Q8C2S0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Usp44Q8C2S0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Usp44Q8C2S0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Usp44Q8C2S0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Usp44Q8C2S0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Usp44Q8C2S0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Usp44Q8C2S0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Gm27023-201ENSMUST00000182372 285 ntBASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.67□□□□□ -0.06
Usp44Q8C2S0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp44Q8C2S0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Gm6621-201ENSMUST00000193251 772 ntBASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Gm44882-201ENSMUST00000205702 802 ntBASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.66□□□□□ -0.06
Usp44Q8C2S0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp44Q8C2S0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.65□□□□□ -0.06
Usp44Q8C2S0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Gm14832-201ENSMUST00000121289 322 ntBASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Gm28882-201ENSMUST00000185504 314 ntBASIC14.65□□□□□ -0.06
Usp44Q8C2S0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.65□□□□□ -0.06
Usp44Q8C2S0 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp44Q8C2S0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms