Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm27437-201ENSMUST00000183429 107 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm28911-201ENSMUST00000188837 117 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm7287-201ENSMUST00000205267 602 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdhr3Q8BL00 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Map1b-203ENSMUST00000223725 2669 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm11637-201ENSMUST00000120601 592 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm26185-201ENSMUST00000157692 266 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm16296-201ENSMUST00000159905 325 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Mir6977-201ENSMUST00000184960 64 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Gm8227-201ENSMUST00000223306 571 ntBASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdhr3Q8BL00 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdhr3Q8BL00 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms