Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.33□□□□□ -0.76
Smg1Q8BKX6 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Gm17214-201ENSMUST00000164501 541 ntBASIC10.32□□□□□ -0.76
Smg1Q8BKX6 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Gm15703-201ENSMUST00000120250 880 ntBASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smg1Q8BKX6 Gm11500-201ENSMUST00000118237 601 ntBASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Gm12453-201ENSMUST00000121981 331 ntBASIC10.31□□□□□ -0.76
Smg1Q8BKX6 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Gm37197-201ENSMUST00000195607 401 ntBASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.31□□□□□ -0.76
Smg1Q8BKX6 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smg1Q8BKX6 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms