Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Gm27701-201ENSMUST00000184498 110 ntBASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chmp2bQ8BJF9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm5866-201ENSMUST00000177881 973 ntBASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Daam2-202ENSMUST00000224595 1926 ntBASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.86□□□□□ -0.35
Chmp2bQ8BJF9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms