Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Gm23363-201ENSMUST00000175024 79 ntBASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Gm19163-201ENSMUST00000223313 780 ntBASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gm12384-201ENSMUST00000119228 919 ntBASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gm43433-201ENSMUST00000196573 481 ntBASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gm10268-201ENSMUST00000085340 555 ntBASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn3Q8BHH8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Clrn3Q8BHH8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Clrn3Q8BHH8 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gm16177-201ENSMUST00000120728 718 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms