Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm5312-201ENSMUST00000203728 547 ntBASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Gm6888-201ENSMUST00000221983 706 ntBASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Mir339-201ENSMUST00000083659 96 ntBASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc5a7Q8BGY9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gm27618-201ENSMUST00000183671 60 ntBASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gm5279-201ENSMUST00000199575 745 ntBASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc5a7Q8BGY9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms