Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Gm26185-201ENSMUST00000157692 266 ntBASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Gm37424-201ENSMUST00000191727 561 ntBASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.73□□□□□ -0.05
Samm50Q8BGH2 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Gm11978-201ENSMUST00000122315 466 ntBASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Gm17420-201ENSMUST00000164753 153 ntBASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Daam2-202ENSMUST00000224595 1926 ntBASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Samm50Q8BGH2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Gm28693-202ENSMUST00000190758 331 ntBASIC14.71□□□□□ -0.05
Samm50Q8BGH2 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Gm9899-201ENSMUST00000065519 555 ntBASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Samm50Q8BGH2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Samm50Q8BGH2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Samm50Q8BGH2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Samm50Q8BGH2 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.7□□□□□ -0.06
Samm50Q8BGH2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Samm50Q8BGH2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Samm50Q8BGH2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Samm50Q8BGH2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms