Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm23270-201ENSMUST00000104055 131 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm14921-201ENSMUST00000118643 908 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm44405-201ENSMUST00000198952 126 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh8Q7TSK3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm24830-201ENSMUST00000102024 166 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms