Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Pck2-205ENSMUST00000226352 2784 ntBASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm6023-201ENSMUST00000118217 606 ntBASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm24526-201ENSMUST00000082921 158 ntBASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcc2Q6PDG5 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.65□□□□□ -0.07
Smarcc2Q6PDG5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Gm24231-201ENSMUST00000104315 133 ntBASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Gm11793-201ENSMUST00000120433 981 ntBASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcc2Q6PDG5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm15198-201ENSMUST00000117283 177 ntBASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm12502-201ENSMUST00000120197 444 ntBASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm5781-201ENSMUST00000219792 443 ntBASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Olfr582-201ENSMUST00000098212 960 ntBASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms