Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gm24231-201ENSMUST00000104315 133 ntBASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gm11591-201ENSMUST00000120063 702 ntBASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.72□□□□□ -0.37
Sp140Q6NSQ5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Gm12502-201ENSMUST00000120197 444 ntBASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sp140Q6NSQ5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms