Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Gm12291-201ENSMUST00000121627 311 ntBASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm4Q6IRU2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Gm5866-201ENSMUST00000177881 973 ntBASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm4Q6IRU2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.02□□□□□ -0.16
Tpm4Q6IRU2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm4Q6IRU2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm4Q6IRU2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm4Q6IRU2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm4Q6IRU2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm4Q6IRU2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms