Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.83□□□□□ -0.03
Ctr9Q62018 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctr9Q62018 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ctr9Q62018 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.03
Ctr9Q62018 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctr9Q62018 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Ctr9Q62018 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctr9Q62018 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctr9Q62018 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.83□□□□□ -0.03
Ctr9Q62018 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctr9Q62018 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctr9Q62018 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.83□□□□□ -0.04
Ctr9Q62018 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.83□□□□□ -0.04
Ctr9Q62018 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ctr9Q62018 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.83□□□□□ -0.04
Ctr9Q62018 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ctr9Q62018 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.83□□□□□ -0.04
Ctr9Q62018 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.83□□□□□ -0.04
Ctr9Q62018 Gm39404-201ENSMUST00000216350 313 ntBASIC14.83□□□□□ -0.04
Ctr9Q62018 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.83□□□□□ -0.04
Ctr9Q62018 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.83□□□□□ -0.04
Ctr9Q62018 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.83□□□□□ -0.04
Ctr9Q62018 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Ctr9Q62018 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ctr9Q62018 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctr9Q62018 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ctr9Q62018 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.82□□□□□ -0.04
Ctr9Q62018 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.82□□□□□ -0.04
Ctr9Q62018 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ctr9Q62018 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ctr9Q62018 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.82□□□□□ -0.04
Ctr9Q62018 Gm25668-201ENSMUST00000157700 129 ntBASIC14.82□□□□□ -0.04
Ctr9Q62018 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.82□□□□□ -0.04
Ctr9Q62018 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.82□□□□□ -0.04
Ctr9Q62018 Gm8712-201ENSMUST00000221090 701 ntBASIC14.82□□□□□ -0.04
Ctr9Q62018 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.82□□□□□ -0.04
Ctr9Q62018 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.82□□□□□ -0.04
Ctr9Q62018 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ctr9Q62018 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.82□□□□□ -0.04
Ctr9Q62018 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.82□□□□□ -0.04
Ctr9Q62018 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctr9Q62018 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Ctr9Q62018 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.81□□□□□ -0.04
Ctr9Q62018 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ctr9Q62018 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.81□□□□□ -0.04
Ctr9Q62018 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Ctr9Q62018 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Gm15808-201ENSMUST00000119046 604 ntBASIC14.81□□□□□ -0.04
Ctr9Q62018 Gm14999-201ENSMUST00000121039 624 ntBASIC14.81□□□□□ -0.04
Ctr9Q62018 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctr9Q62018 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.81□□□□□ -0.04
Ctr9Q62018 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms